CDS

Accession Number TCMCG006C07034
gbkey CDS
Protein Id XP_022569606.1
Location join(12093..12190,12568..12619,12823..12938,13040..13090,13226..13345,13541..13660,13770..13917,14207..14377,14566..14712,14798..14904,15008..15098,16201..16342,16455..16623,16714..16830,16906..17272)
Gene LOC111212361
GeneID 111212361
Organism Brassica napus

Protein

Length 671aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_022713885.1
Definition uncharacterized protein LOC111212361 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category S
Description Rhamnogalacturonate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K18195        [VIEW IN KEGG]
EC 4.2.2.23        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs -

Sequence

CDS:  
ATGAGAAACGGAGCTCCGGTAATGAAGATGGGTCGGGTCATGACTCAGGTTTTTGTTCTGATATTCCTTCTTCAAGGTGTTCATTCCCGAACGTTACGAAGCGAATCAAATAATGCCGCGGTTACGGTTAACACATCTGGCGGTAAACAAGTGGTTGTTGATAATGGTATAATCCAAGTCACCTTCTCGAATCCAGCGGGCTTAGTTACTGGAATCAAGTATAAAGGCTTTGACAATGTGTTGAACGAAAAAATCAAGAATCGAGTGTATTGGGATATAGTATGGTATGAACCAGGACAAGTATCGCAGACAGATTTTTTAATAGGAGAAAAGTTCAAAATAATAAGTCAAACAAGTGAGCAAGTCGAAATTTCATTTTCTAAAACATGGGATACCTCTCGACGCGGCTCGACAGTCCCATTAAACGTGGATAAAAGATATATTATTCGACGCGGTGTAATCGGAGTGTATATGTACGGTGTGTTAGAGAGGTTAGAAGGTTGGCCGGCAGTAACAATGGACCAAACCAGAATCGTCTACAAGCTTAACGCAACAAAGTTCGATTATATGGCTGTAGCAGATCGTCGACAGAATCTAATGCCTTTAGAAGCAGATCGAAATCTCACCGATGGTAGTGCCGCTACATTGGAATACAAAGAAGCGGTTCGGTTGGTAAAACCACAAAATAAATTATTTAAAGGGCAGGTTGACGATAAGTATCTTTACTCAATGGAAGGCAAGGACAACAGACTACATGGTTGGATCGCTTCTGAACAACGTGTCGGCTTCTGGATTATTACTGCCAGCAACGAGTTCCGTACTTGTGGGCCCGTCAAACAAGAACTCACTTCTCATGTTGGACCCACCTTACTTTCTATGTTTACAAGTACACACTATGCGGGAAAAGAACTCAACACAACTTACGCAAGCGATGTGCCGTGGAAGAAGATGTTTGGTCCTGTCTTTGTTTATCTTAACTCTGCCCCCTCTCATGATCTCATGTGGACCGATGCTAAACGACAGTTGGCTGCCGAGGTTAAAAGCTGGCCTTATGACTTCGTGAAGTCAGTAGATTACCCTCTTCGCCAACAAAGAGGAACAGTCAAGGGTCAACTATTTGTCATGGACAGCTTCAAAAGCAAGTCGAAGTTAAACGGAGAGTTTGCTTTTGTGGGTTTAGCATTACCTGGCGAAGTTGGTTCATGGCAAACCGAAAACAAGGGATATCAATTTTGGACAAAAGCAGACAAAATGGGGATGTTCACAATAGCGAATGTGAGACCTGGGACATATAACCTCTTCGCATGGGCTGCCGGACATATTGGCGACTATAAATACGAGCGTGAAATTATAATTACACCAGGTAAGGCAATAAACGTAGGATCCTTAGTGTATGAGCCGCCAAGAAGTGGTCCGACGCTGTGGGAGATCGGTGTACCGGATCGGACCGCCTTAGAATTCAATATCCCAGATCCGGACCCAGCCCTTGTGACCAAACTATATGCAAATCACCCAAATGCTCCTGAAGACAGATTTAGACAATATGGTCTATGGGATCGTTACAAAGTATTGTATCCTCGAGAAGATGTTACTTTTACTGTTGGAGTGAGTGACTATAAAAAAGATTGGTTCTTTGCACATCTCAACAGGAGAGCTGGAGAAAAGAAACTTCAAGCAACGACATGGAAAATTGTTTTTAACTTAAAACAAGTGTCCCAAACTGGAAATTATACTCTTCGAATGGCTTTGGCTGCAGCCAACACTGCCGATATATTAGTTCGGGTCAACGAACCTAGCTCCAAACCTATGTTTAGGACTGGGTTAGTAGGTCGGGATAACGCGATCGCTAGACATGGAATTCATGGGTTATACAGATTGTTCAATATAGACGTTCAGAGAAAGTTGCTTAAGGTTGGTGACAATACGATTTTTCTCACTCAAAACCGGGTCACTAGTATTTTTACAGGTGTCATGTATGATTATCTTCGATTGGAAGGTCCTTCAGGAGCCATATAA
Protein:  
MRNGAPVMKMGRVMTQVFVLIFLLQGVHSRTLRSESNNAAVTVNTSGGKQVVVDNGIIQVTFSNPAGLVTGIKYKGFDNVLNEKIKNRVYWDIVWYEPGQVSQTDFLIGEKFKIISQTSEQVEISFSKTWDTSRRGSTVPLNVDKRYIIRRGVIGVYMYGVLERLEGWPAVTMDQTRIVYKLNATKFDYMAVADRRQNLMPLEADRNLTDGSAATLEYKEAVRLVKPQNKLFKGQVDDKYLYSMEGKDNRLHGWIASEQRVGFWIITASNEFRTCGPVKQELTSHVGPTLLSMFTSTHYAGKELNTTYASDVPWKKMFGPVFVYLNSAPSHDLMWTDAKRQLAAEVKSWPYDFVKSVDYPLRQQRGTVKGQLFVMDSFKSKSKLNGEFAFVGLALPGEVGSWQTENKGYQFWTKADKMGMFTIANVRPGTYNLFAWAAGHIGDYKYEREIIITPGKAINVGSLVYEPPRSGPTLWEIGVPDRTALEFNIPDPDPALVTKLYANHPNAPEDRFRQYGLWDRYKVLYPREDVTFTVGVSDYKKDWFFAHLNRRAGEKKLQATTWKIVFNLKQVSQTGNYTLRMALAAANTADILVRVNEPSSKPMFRTGLVGRDNAIARHGIHGLYRLFNIDVQRKLLKVGDNTIFLTQNRVTSIFTGVMYDYLRLEGPSGAI